Yea, I also just uploaded a battle where I embarrassingly lost to a Bulk Up Toxicroak, but Stealth Rock damage did 13% for both Gyarados and Thundurus.
http://aesoft.org/pokemon/replay-Tho...in--2011-08-16
Also, my opponent started out with 5 Pokeballs - is this because I did not saw the 6th monster of his team?
And occasionally when I lose my mons, an extra Pokeball shows up on my side. I ended up with like 9 Pokeballs on my side lol.